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How to draw Survival Curve by TCGA

Shulou Source: shulou.com Published: 2022-06-01 07:26:11 10月03日 Update

Editor to share with you how to draw the survival curve of TCGA, I believe that most people do not know much about it, so share this article for your reference, I hope you can learn a lot after reading this article, let's go to understand it!

Drawing of Survival Curve

After the completion of single-factor survival analysis, a single-factor survival curve can be drawn.

# Integration of expression information and survival data into exprSet The format is as follows: bcr_patient_barcode time status LINC01587 XXbac_B461K10.41 TCGA-2W-A8YY 1480 3.981761 23.890572 TCGA-4J-AA1J 2260 37.491171 19.638233 TCGA-BI-A0VR 1505 10.891560 3.630524 TCGA-BI-A0VS 925 3.877719 19.388595 TCGA-BI-A20A 72 0 16 . 789319 12.210416 TCGA-C5-A0TN 348 1 7.835572 28.7304 drawing a generation curve my.surv for significant genes

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