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How to use HiC-Pro

Shulou Source: shulou.com Published: 2022-06-01 07:51:35 09月26日 Update

This article mainly shows you "how to use HiC-Pro", the content is easy to understand, clear, hope to help you solve your doubts, the following let the editor lead you to study and learn "how to use HiC-Pro" this article.

HiC-Pro software is very flexible, it can not only deal with Hi-C data of different database building methods, but also deal with capture Hi-C data. The software installation process is as follows

Yum install-y epel-release

# R

Yum install-y R

R

Install.packages (c ("ggplot2", "RColorBrewer"))

# python

Yum install-y gcc gcc-c++ make

Yum install-y python2 python-devel python2-pip

Pip install pysam

Pip install "scipy

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