How to use HiC-Pro
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HiC-Pro software is very flexible, it can not only deal with Hi-C data of different database building methods, but also deal with capture Hi-C data. The software installation process is as follows
Yum install-y epel-release
# R
Yum install-y R
R
Install.packages (c ("ggplot2", "RColorBrewer"))
# python
Yum install-y gcc gcc-c++ make
Yum install-y python2 python-devel python2-pip
Pip install pysam
Pip install "scipy